Amir Mohammad Ketabchi, Berna Morova, Yiğit Uysalli, Musa Aydin, Furkan Eren, Nima Bavili, Dariusz Pysz, Ryszard Buczynski, and Alper Kiraz
Journal of Microscopy, to appear (2024)
DOI: 10.1111/jmi.13296 (PDF)
Category: Journal Papers
Differential evolution-based neural architecture search for brain vessel segmentation
Zeki Kuş, Berna Kiraz, Tuğçe Koçak Göksu, Musa Aydın, Esra Özkan, Atay Vural, Alper Kiraz, and Burhanettin Can
Engineering Science and Technology, an International Journal 46, 101502 (2023)
DOI: 10.1016/j.jestch.2023.101502 (PDF)
DeepCAN: A Modular Deep Learning System for Automated Cell Counting and Viability Analysis
Furkan Eren, Mete Aslan, Dilek Kanarya, Yigit Uysalli, Musa Aydin, Berna Kiraz, Omer Aydin, and Alper Kiraz
IEEE J. Biomed. Health. Inform. 26 (11), 5575-5583 (2022)
DOI: 10.1109/JBHI.2022.3203893 (PDF)
An LED-Based Structured Illumination Microscope Using a Digital Micromirror Device and GPU Accelerated Image Reconstruction
Musa Aydın, Yiğit Uysallı, Ekin Özgönül, Berna Morova, Fatmanur Tiryaki, Elif Nur Firat-Karalar, Buket Doğan, and Alper Kiraz
PLOS ONE 17 (9), e0273990 (2022)
DOI: 10.1371/journal.pone.0273990 (PDF)
Understanding the link between inflammasome and apoptosis through the response of THP-1 cells against drugs using droplet-based microfluidics
Elif Gencturk, Müge Kasım, Berna Morova, Alper Kiraz, and Kutlu Ulgen
ACS Omega 7 (19), 16323–16332 (2022)
DOI: 10.1021/acsomega.1c06569 (PDF)
A Deep Learning Model for Automated Segmentation of Fluorescence Cell images
Musa Aydın, Berna Kiraz, Furkan Eren, Yigit Uysalli, Berna Morova, Selahattin Can Ozcan, Ceyda Acilan, and Alper Kiraz
J. Phys.: Conf. Ser. 2191, 012003 (2022)
DOI: 10.1088/1742-6596/2191/1/012003 (PDF)
An easy-to-fabricate microfluidic shallow trench induced three-dimensional cell culturing and imaging (STICI3D) platform
Umut Coskun, Funda Kus, Ateeq Ur Rehman, Berna Morova, Merve Gulle, Hatice Baser, Demet Kul, Alper Kiraz, Kemal Baysal, and Ahmet Erten
ACS Omega 7 (10), 8281−8293 (2022)
DOI: 10.1021/acsomega.1c05118 (PDF)
Use of an Elastic Buffer Layer for Improved Performance of a Polymer Microcylinder Ring Resonator Hydrogen Sensor
N. Bavili, B. Ali, B. Morova, B. E. Alaca, and A. Kiraz
Sensor. Actuat. B-Chem. 358, 131431 (2022)
DOI: 10.1016/j.snb.2022.131431 (PDF)
Optically Transportable Optofluidic Microlasers with Liquid Crystal Cavities Tuned by the Electric Field
Alexandr Jonáš, Zdenek Pilat, Jan Jezek, Silvie Bernatov, Petr Jedlika, Mehdi Aas, Alper Kiraz, Pavel Zemanek
ACS Appl. Mater. Interfaces 3 (43), 50657-50667 (2021)
DOI: 10.1021/acsami.1c11936 (PDF)
Linear Cavity Tapered Fiber Sensor Using Amplified Phase-Shift Cavity Ring-Down Spectroscopy
R. M. A. Ayaz, Y. Uysalli, B. Morova, and A. Kiraz
J. Opt. Soc. Am. B 38 (6), 1756-1762 (2021)
DOI: 10.1364/JOSAB.419768 (PDF)
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